aa |
a table of Codon-Amino Acid Abbreviations |
extract_clinvar |
Extract the genes and variants related to a genetic disorder from ClinVar |
extract_genes_orphanet |
Extract the genes related to a genetic disorder from Orphanet |
extract_omim |
Extract the genes and variants related to a genetic disorder from OMIM |
extract_pubmed |
Extract the genes and variants related to a genetic disorder from PubMed |
extract_uniprot |
Extract the genes and variants related to a genetic disorder from UniprotKB |
genes_add_pubmed |
Compile the disease-related genes from PubMed abstracts into the gene set from the public databases |
genes_compile |
Compile the disease-related genes from multiple public databases |
grep_split |
Extention for grep function |
localPDB |
Localize the public databases including HPO, MedGen, GeneReview, HGNC, Orphanet, ClinVar and Uniprot. |
pheno_extract_HPO |
Extract the genes related to a disease or disease alias from HPO database. |
variants_compile |
Compile the disease-related variants from multiple public databases |