TSCAN-package | TSCAN: Tools for Single-Cell ANalysis |
difftest | difftest |
exprmclust | exprmclust |
lpsdata | Sinlge-cell RNA-seq data for BMDC cells before and after LPS stimulation |
mapCellsToEdges | Map cells to edges |
mapCellsToEdges-method | Map cells to edges |
orderCells | Compute pseudotimes from the MST |
orderscore | orderscore |
perCellEntropy | Compute the per-cell entropy |
perCellEntropy-method | Compute the per-cell entropy |
plotmclust | plotmclust |
preprocess | preprocess |
quickPseudotime | Quick MST-based pseudotime |
quickPseudotime-method | Quick MST-based pseudotime |
reportEdges | Report MST edge coordinates |
reportEdges-method | Report MST edge coordinates |
singlegeneplot | singlegeneplot |
testPseudotime | Test for differences along pseudotime |
testPseudotime-method | Test for differences along pseudotime |
TSCAN | TSCAN: Tools for Single-Cell ANalysis |
TSCANorder | TSCANorder |
TSCANui | TSCANui |