clScore |
Computes a distance between two partitions of the same data |
iterativeRUV |
Remove unwanted variation from a gene expression matrix using control genes, optionally replicate samples, and iterative estimates of the factor of interest |
naiveRandRUV |
Remove unwanted variation from a gene expression matrix using negative control genes |
naiveReplicateRUV |
Remove unwanted variation from a gene expression matrix using replicate samples |
svdPlot |
Plot the data projected into the space spanned by their first two principal components |