Individual-Specific ceLl typE referencing Tool


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Documentation for package ‘ISLET’ version 1.10.0

Help Pages

caseEst ISLET reference estimation results extraction
ctrlEst ISLET reference estimation results extraction
dataPrep Data preparation step utility function before using ISLET
dataPrepSlope Data preparation function specifically for slope effect testing
GE600 ISLET deconvolution example raw input data
GE600age ISLET example datasets for slope variable testing in csDE
GE600age_se ISLET example datasets for slope variable testing in csDE
GE600_se ISLET deconvolution example raw input data
imply _*imply*_: _*imp*_roving ce_*l*_l-t_*y*_pe deconvolution using personalized reference
implyDataPrep Data preparation step utility function before using imply
isletSolve Solving individual-specific and cell-type-specific reference panels
isletTest Testing for cell-type-specific Differential Expression (csDE) genes