Dependency Modeling Toolkit


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Documentation for package ‘dmt’ version 0.8.20

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centerData Center data matrix.
compare.estimate.and.truth Measuring model accuracy.
dependency.score dependency.score
DependencyModel-class Class "DependencyModel"
drCCAcombine A function to combine several data sets
expdata1 Example data for drCCA
expdata2 Example data for drCCA
fit.dependency.model Fit dependency model between two data sets.
generate.toydata Toy data generation
getModelMethod Class "DependencyModel"
getModelMethod-method Class "DependencyModel"
getParams Class "DependencyModel"
getParams-method Class "DependencyModel"
getPhi Class "DependencyModel"
getPhi-method Class "DependencyModel"
getScore Class "DependencyModel"
getScore-method Class "DependencyModel"
getW Class "DependencyModel"
getW-method Class "DependencyModel"
getWindowSize Class "DependencyModel"
getWindowSize-method Class "DependencyModel"
getZ Class "DependencyModel"
getZ-method Class "DependencyModel"
pcca Fit dependency model between two data sets.
pfa Fit dependency model between two data sets.
pfa.neg.log.likelihood Likelihood for the models.
plotVar Data-specific and shared variance for several dimensionalities
ppca Fit dependency model between two data sets.
regCCA Generalized Canonical Correlation Analysis
sharedVar Shared variation retained in the combined drCCA representation
specificVar Data-specific variation retained in the combined drCCA representation
X An example data set
Y An example data set
z.expectation Expectation of the latent variable.