Spatial point data simulator for tissue images


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Documentation for package ‘spaSim’ version 1.10.0

Help Pages

bg1 Background cells (4915 cells in a 2000*2000 window)
format_spe format_spe
multiple_background_images Simulate multiple background images (mixed cell types)
multiple_images_with_clusters Simulate multiple images with clusters
multiple_images_with_immune_rings Simulate multiple images with immune rings
plot_cells plot_cells
simulate_background_cells Simulate background cells
simulate_clusters Simulate clusters
simulate_double_rings Simulate double immune rings
simulate_immune_rings simulate_immune_rings
simulate_mixing Simulate mixed background image
simulate_stripes simulate_stripes
TIS Tissue Image Simulator (TIS)