Detection of de novo deletion in targeted sequencing trios


[Up] [Top]

Documentation for package ‘MDTS’ version 1.28.0

Help Pages

MDTS-package The MDTS package for Detection of Denovo Deletions from Targeted Sequencing Data Using Minimum-Distance
calcBins Sample driven calculation of bins for counting
calcCounts Creating the raw count matrix
calcMD Calculating the Minimum Distance matrix
denovoDeletions Denovo Deletion Calling
getMetaData Constructor for metadata
MDTS The MDTS package for Detection of Denovo Deletions from Targeted Sequencing Data Using Minimum-Distance
normalizeCounts Calculating the normalized M scores
segmentMD Circular Binary Segmentation on Minimum Distances
visualizeDeletion Visualization for deletions