Protein-protein interaction network

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Identification of shortest paths between proteins

Source Protein:
Target Protein:


Identify the paths that reflect the minimum cost
Identify the paths that reflect the least number of steps
Show leaf nodes that can interact with at least two main proteins
Show interactions between leaf nodes
   main node colors:
   leaf node colors:

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Show a list of genes in PPI network





Width = 1020
Height = 400


Protein name Fill color Circle size Stroke color Stroke size Text color Text size Text position Delete
Source Target Edge color Edge size Arrow style Curve type Solid line/Dash/Dot Delete
Source Target

Graph detail:

How to use

Ctrl(⌘)-drag from one node to another to select an edge1.
Drag a node to move the graph layout.
Click a node or an edge to select it.
Press the ctrl(⌘) key and select two nodes to select an edge.
Use the delete key to delete a selected node or link.

For touch screen users:
1Press the 'Ctrl key' button and select two nodes to add or select an edge.

Shortcut key

Reduce the size of the selected node or link Increase the size of the selected node or link
Freeze or release the selected node Change the arrow style of the selected link
Change the curve type of the selected link Change the dot/dash/solid line style of the selected link