Visualization and management of the protein-protein interaction networks.


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Documentation for package ‘cisPath’ version 1.46.0

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cisPath Visualization of the shortest paths of functional interaction between proteins
cisPath-method Visualization of the shortest paths of functional interaction between proteins
combinePPI Combine PPI information from databases
combinePPI-method Combine PPI information from databases
easyEditor Easy editor for network graphs
easyEditor-method Easy editor for network graphs
formatiRefIndex Format PPI files downloaded from the iRefIndex database
formatiRefIndex-method Format PPI files downloaded from the iRefIndex database
formatPINAPPI Format PPI files downloaded from the PINA database (MITAB Format)
formatPINAPPI-method Format PPI files downloaded from the PINA database (MITAB Format)
formatSIFfile Format PPI file downloaded from the PINA2 database (SIF Format)
formatSIFfile-method Format PPI file downloaded from the PINA2 database (SIF Format)
formatSTRINGPPI Format PPI file downloaded from the STRING database
formatSTRINGPPI-method Format PPI file downloaded from the STRING database
getMappingFile Generate the identifier mapping file
getMappingFile-method Generate the identifier mapping file
networkView Visualization of the interactions between input proteins
networkView-method Visualization of the interactions between input proteins